KiwiRail engineering manager Peter Dautermann said moving the trains is "a massive job".
"A team of specialists was needed to manage the shift. The logistics involved in preparing to move these locomotives is enormous."
Two cranes were required to lift each of the trains onto the transporter.
KiwiRail freight service 737 stopped in a tunnel near Hapuku, north of Kaikoura on the morning of the November 14 earthquake.
The freight it was carrying was taken off it in December, and the 23 wagons were lifted out and taken to Christchurch by road earlier this month.
The trains have been wrapped in plastic to protect them from the salt air.