"Council recognised that the eel population within the ponds needed to be managed during the upgrade," he said.
"Iwi are also concerned about the tuna [eels], recognising that they are a significant population, contributing through reproduction to the greater population of eels within New Zealand."
Mr Hopman said the eels have found their own way into the ponds and their position on the top of the food chain indicates the eco-system that makes up the treatment process is working well.
Kahungunu is looking into the Ministry of Environment's Fresh Start for Fresh Water Fund to contribute to some of the more expensive ideas if necessary.
Mr Hopman will work through the funding application process with iwi and believes funding can be secured if required. He said experience from previous treatment pond decommissionings has shown that eels find their own way into new environments when the food supply reduces.
Mr Hopman said the inflows will be diverted to the new ponds in April and the work to install the pipeline will start soon after.
The new ponds will take approximately four to six weeks to fill, and once filled, the transfer pipeline will be commissioned and water will flow from the new to the old pipelines and create the scent trail.
The recommendations will go to councillors at the meeting this afternoon.