The rate for Pacific women actually increased, from 19.7 per cent to 20.6 per cent.
The rates for Maori and Pacific men dropped more. But even those changes were not statistically significant because of small sample sizes.
Smoking rates for Europeans and Asians did drop significantly.
Dr Glover said anti-smoking policies such as the higher taxes, and recent decisions by Wellington and Hutt councils to ban smoking in open public spaces, were now effectively a form of discrimination.
"It is now illegal to discriminate against people on the grounds of ethnicity, age, mental illness or sexuality, but there is this handy tool now which is smoking, which [is] concentrated with higher prevalence amongst the 'undesirables'.
"So people are now, I believe, using smoking as a legitimate and legal way to ... discriminate against people."
She said Maori, and especially Maori women, had the highest smoking rates "because of the cumulative stress of the environment".
She said it was time for a more compassionate policy.
However Otago University public health professor Nick Wilson said tax rises did cut smoking rates and should be pursued with other measures such as reducing tobacco outlets.
He said the Budget's further tax hikes would reduce the daily smoking rate in 2020 from 22.7 per cent if taxes had been frozen at current levels to 21.4 per cent for Maori, and from 9.3 per cent to 8.9 per cent for non-Maori.