The trio were later re-tested by the club, with those blood tests not returning elevated levels of HGH.
There is no suggestion any player has acted improperly.
"We were very unhappy that the extended (blood) testing was conducted. It was done without our knowledge,'' Canavan told Fairfax.
The Roosters, who finished the season as minor premiers and are favourites to take out premiership in a fortnight, informed the NRL's integrity unit of the unusual test results midway through this season.
Sean Carolan, who runs Nubodi, denied the inconsistent growth hormones among some tested players was a result of taking illegal supplements.
HGH is banned by ASADA as it is used to strengthen connective tissue which reduces the probability of injury.
The Roosters face Newcastle on Saturday night in a preliminary final, with the winner to progress to the grand final on October 6.