The Sounders finished the game with seven men, with Brad Evans also sent off in the 69th minute and Obafemi Martins stretchered off after all three substitutions had been made.
US Soccer, rather than Major League Soccer, oversees the US Open Cup and Sports Illustrated's Grant Wahl reported on Wednesday the federation was gathering information on the incident, which could be found to be "referee assault".
According to the federation's policy manual, referee assault includes "damaging the referee's uniform or personal property" and carries a suspension that could range from six matches to three months.
The Dempsey drama comes as the United States prepare to defend their title in the CONCACAF Gold Cup which starts on July 7.
The winners of the regional championship for North and Central America and the Caribbean book a place in the 2017 FIFA Confederations Cup, and the Americans expected to go into their title defence on a high after recent friendly victories over the Netherlands and Germany.
-AAP