Mr Duncan said 95 per cent of the thunder activity today had been offshore and the main front was expected to clear Auckland by 6.30pm.
The MetService thunderstorm watch would remain in place until 11pm, while WeatherWatch said it was unlikely to issue more updates today.
The state-owned MetService and privately owned WeatherWatch services are split on more than just their forecasts, with another storm brewing over public access to rain radar images.
Mr Duncan today criticised the MetService for making only one of its rain radar image available to the public every hour, unless users were willing to pay.
That compares with Australia, Canada and the United States, where up to 20 images an hour were freely available to the public.
Mr Duncan said unless the rain radar updates were updated regularly they were "basically useless".
"A severe thunderstorm can come and go without even being detected in an hourly update. But with updates every 3 or 4 minutes the public can track particular rain bands and see if their property is at risk," Mr Duncan said.
"It is a significant tool used by the public all over the world for protecting life and property - except here in New Zealand."