But the Health and Disability Director of Proceedings, Aaron Martin, is challenging three other parts relating to diagnosing gastritis without proper checks, and failing to adequately document care.
He was unable to elaborate on why he was appealing because the matter was before the High Court, but during the hearing said the misconduct was of such a nature that it warranted deregistration or suspension.
Dr Vatsyayann was struck off the medical register last May after registering dead people to his practice in order to gain extra funding.
The tribunal said rules have been placed on him which will make it difficult for him to practise again.
He will have to have a psychological assessment, approved by the Medical Council, before resuming practice, and for the first three years seek ongoing clinical psychological treatment, and work in a group practice under a supervisor, all of which must be approved by the Medical Council.