One of the pumps was in position and the other was still to be placed.
Salvage teams pumped 22 tonnes of lubricating oil out of the Rena's engine room onto the barge Awanuia yesterday.
The ship's hull continued to be monitored and no further significant buckling was found yesterday.
Sonar scans of the seabed are continuing to locate more of the 88 containers which fell off the Rena in a storm three weeks ago.
Thirty-two have been found, several on the seabed within 1km of the ship, but 56 were still unaccounted for.
Mr Berry said it was like "looking for a needle in a haystack".
"The first step is to find them, and then they will use cranes and barges to recover them off the sea floor."
Underwater transponders have also been fixed to four containers known to contain hazardous goods so they can be tracked if they are lost overboard.
A crane barge from Australia has arrived but efforts to lift containers off the Rena will not begin until after the last of the oil has been removed.
Two volunteer beach clean-ups at Maketu and Papamoa are scheduled today.
The oiled wildlife facility was caring for 403 birds last night, including three oiled birds which were yet to be washed.