Last year, NZ First Leader Winston Peters also boycotted Te Tii, after members of the marae barred the media from covering a political forum held on its grounds as well as Governor-General Dame Patsy Reddy's official powhiri.
Marae representatives put up large tarpaulins across gaps in the hedge during Dame Patsy's powhiri, preventing outsiders from watching.
Days earlier several media organisations were offered exclusive broadcasting rights if they paid $10,000.
Waitangi National Trust chairman Pita Paraone said in June events at Te Tii earlier in the year had been the last straw.
"People have tended to forget what is the real intention of welcoming visitors. They seem to have forgotten that concept," he said.
Following Monday's powhiri, Ardern will attend the Royal New Zealand Navy Beat the Retreat ceremony as well as the Waitangi National Trust dinner.
Waitangi Day, the anniversary of the signing of the Treaty of Waitangi, on Tuesday is a public holiday.
- NZN