"We could also see a lot still in the water at the top of the pass that hadn't swum into the net yet," she said.
The fish pass is designed for all migratory native fish species found in the catchment.
"Now we have found that our fish ladder is successful we will do the same thing in other places, so if members of the public know of any man-made barriers or landowners who would like to fix known barriers then please get in touch with the freshwater team at Horizons Regional Council.
"We can open up more habitat, which ultimately means people have more fish to catch," Regtien said.
The plan is to install four fish passes this summer alongside fencing and planting under the Manawatu River Leaders' Accord.
Brown said four out of five of the whitebait species are in decline.
"The work we do in fixing fish barriers means native fish can access more habitat, and hopefully by increasing the habitat will increase the populations," he said.
The Manawatu River Leaders' Accord was signed by iwi, local and central government, and farming and environmental groups in 2010, pledging to take responsibility for the poor health of the river and improve it's mauri (lifeforce).
In 2012, the accord received $5.2 million from the Government, plus approximately $46m from Accord partners, one of which is Horowhenua District Council.
The fund has contributed to more than 66,420 native plantings alongside waterways; more than 208,487 metres of stream fencing; 98 Environmental Farm Plans completed to help farmers reduce the environmental footprint of farming; 12 fish passage improvements; six wastewater treatment plant upgrades; and 19 community-led projects completed or under way.