An Auckland Transport spokesman said the changes were due to the police operation at the Downtown Ferry Terminal. Passengers are being warned to expect delays on other ferry services as they complied with Police requests.
The changes were in place until further notice or police advised otherwise.
"We apologise for the inconvenience but appreciate your patience and understanding," an AT tweet said.
Police believe they know the man's identity and, as they try to establish what happened, are keen to speak to two men he was speaking to before he ended up in the water.
Police were called to the area about 4.35am this morning and have been searching for the man since.