The first spillage happened after a Powerco pole fuse blew causing wastewater to discharge into the stream from council's pumping station.
The fuse was repaired four hours after Powerco was told of the problem and the discharge stopped.
Water testing revealed high levels of contamination and a warning sign was erected. It was removed nine days later when water samples came back clear.
The sign went back up two days later after the second spillage which turned out to be less serious and has since been removed again.
Mr Hughes said a design fault was found with the Mowhanau pumping station and that non-return valves have now been installed.
Those would lessen the likelihood of further spillages by giving council staff more time to respond to any further incidents before wastewater was discharged into the stream.
Mayor Hamish McDouall noted that council staff had responded quickly to both incidents.