There was just 7,500 tonnes of whole milk powder available at the GDT event, compared with 20,700 tonnes a year ago, according to Kilsby.
The AgriHQ 2015-16 Farmgate Milk Price rose a couple of cents to $4.11 per kilogram milk solids.
"A lift in the price of futures contracts trading on the NZX Dairy Derivatives market provided some support to this price," Kilsby said.
The AgriHQ 2016-17 Farmgate Milk Price advanced to $4.76/kgMS. This price assumes whole milk powder prices will continue to rise in the coming months and reach US$2,500 by the end of the calendar year, Kilsby said.
In the GDT auction, butter milk powder dropped 5.5 per cent to US$1,366 a tonne, while butter declined 5.5 per cent to US$2,601 a tonne.
Skim milk powder fell 3.6 per cent to US$1,676 a tonne, while lactose decreased 2.7 per cent to US$693 a tonne, and anhydrous milk fat slipped 1.6 per cent to US$3,195 a tonne.
Meanwhile, cheddar rose 1.8 per cent to US$2,727 a tonne, while rennet casein rose 3.5 per cent to US$5,024 a tonne.
The New Zealand dollar last traded at 69.25 US cents at about 12.55pm in New York, compared with 70.20 US cents at 5pm in Wellington the previous day.
There were 118 winning bidders out of 147 participating bidders at the 12-round auction. The number of qualified bidders rose to 620, from 617 at the previous auction.