But MPI, which by this week had finalised just three out of 31 claims totalling $6.9 million, has ruled out the federation's idea.
Response director Geoff Gwyn said MPI could not confirm a compensation payment would be offered until a full assessment of a claim had been undertaken, regulatory requirements met and the "appropriate" sign-off received.
MPI did however offer to talk to affected farmers' banks to inform them of the compensation process, he said.
MPI has ordered the destruction of another 20,000-plus cattle, mostly in the South Island, before the new dairy season starts in an effort to contain the bacterial disease first identified in Oamaru dairy herds in July last year. MPI does not yet know how it arrived in New Zealand.
The debilitating and economically costly disease is established in many countries overseas, including New Zealand's trading partners, which have elected to try to manage it. New Zealand is the first country to try to eradicate it with a mass cattle cull as MPI does not believe it is yet well-established here. It affects dairy and beef cattle.
Lewis said there were biosecurity and economic risks in leaving farmers financially stranded.
Farmers having to start again needed to buy the "right" animals and as many as possible at one time. Only being able to afford a handful of replacements from different places and properties to make up a herd was a biosecurity risk, he said.
The economic risk would come when eventually compensated farmers all hit the livestock market at once, distorting and pushing up prices.