Mr Whittaker said the earthworks that were carried out were only one metre deep, and as such had future implications for land use.
"If earthworks like this could affect the aquitard what happens when an apple grower wants to put in a strainer post, or Unison put in a power pole, or an orchardist digs a drain?
"Now that we know this risks penetrating the aquitard, all those allowable activities could potentially be contamination sources."
As such, he said the land use around the Brookvale bores was up for significant change.
"What the inquiry's report highlighted was that a lot of work will need to be done around the impact of land use."
It raised questions over whether the likes of sheep should continue to be allowed to graze in areas such as Brookvale, and the issue was one that would be faced both in Hawke's Bay and around the country, he said.
"The report has come up with some answers that the public wanted but also a lot of questions around land use, and all stakeholders will have to be part of those discussions - from landowners to councils."