Between 10pm Wednesday and 10am Thursday the Whanganui weather station at the airport recorded 43.8mm of rain, which was pretty significant, Fernandes said.
In Whanganui, Fernandes said the heaviest rainfall period was between 6pm and 7pm Wednesday when 12mm of rain fell.
Only hourly data was available, so within that hour the 12mm could have fallen within 10 minutes, but there was no way of knowing, he added.
"Since midnight there has been fairly persistent rainfall in Whanganui."
Fernandes said there was only a very small possibility of rain on Friday, with a dry weekend ahead.
A maximum temperature of 12C is forecast for Friday, with Saturday getting up to 14C and 15C on Sunday.
"Saturday and Sunday early mornings will be quite cold with minimum temperatures of 3C, most likely around sunrise."