"But, this does not necessarily mean these buildings are earthquake prone, they just require further assessment by a professional engineer."
He said the desktop assessment had nothing to do with the structural components of a building.
"A building is earthquake prone if it fails in a moderate earthquake. It is measured as one that's structural performance is less than 33 per cent of the new building standard."
Of the buildings assessed 631 were deemed to be of low risk, 626 were of medium risk and 69 at high risk.
The assessments do not include residential buildings unless they are two or more stories high and contain three or more household units.
Councillors expressed their concerns about how much it could cost building owners and how quickly the legislation could come into effect.
Mr Holder said initial assessments could cost between $500 and $1500, depending on size and complexity and new legislation was not expected to come into force until at least mid-2014, but probably not until early 2015.
He also said there was a shortage of qualified structural engineers in Rotorua which could become a problem.
He said it was not the Government pushing for structural testing, it was banks, insurance companies and tenants of buildings.
He urged building owners not to panic as desktop assessments only took into account the age, size, number of levels, number of occupants and building usage - which was why a structural assessment by a professional was required.