Mr Edmonds said the church is still regularly used and as well as its parishioners, relatives of those buried there still visit and tend their graves.
Locals had tried to control the rabbits in the past, but this time numbers had got to the point where the regional council had been approached for help.
"We were getting really worried that someone was going to seriously injure themselves either by falling into or tripping over one of the rabbit holes, or that the holes were going to cause graves to collapse or headstones to topple," Mr Edmonds said.
Help arrived in the form of Kaitaia-based NRC biosecurity officer Mike Knight, who fumigated the rabbit holes, with Mr Edmonds' assistance.
The holes have also been filled and the church will be monitored over the next two months for signs of any rabbit survivors.
Mr Edmonds is grateful to the council, for its initial help and for arming him with the knowledge of how to control rabbit numbers.
"While it may initially sound like quite an unusual problem, this isn't the first time my colleagues and I have helped a church with an issue like this," Mr Knight said.
He's aware of at least two other Northland churches with similar rabbit problems in recent years.
Meanwhile, Mr Knight says general information about animal and plant pests - and how to control them - is available online at the regional council website.