"The more we know about elvers the more effective we can be in helping eels or tuna to thrive, not just in this river, but others around New Zealand as well."
Dr Williams said very little work had previously been done in New Zealand on what made habitats suitable for eels.
Nga Kaitiaki O Nga Wai Maori member Allan Halliday said the hapu was pleased Niwa, DOC and Fonterra had recognised the issue iwi have long been concerned about.
"This project with Niwa combines Matauranga Maori, or Maori knowledge, and modern-day science. We're blending our two cultures and working together so we can overcome the many obstacles facing tuna on a daily basis," Mr Halliday said.
The study is part of the shared Fonterra and DOC Living Waters project.
The Hikurangi Swamp and Northern Wairoa River form one of five major dairy region catchments targeted for water quality improvement in Living Waters.