On Friday, Hastings District Council said that an independent Tonkin and Taylor report found there is very low risk to the Frimley bore field from Lowe's Lake.
But a spokesperson said that both HDC and Hawke's Bay Regional Council agreed that the way stormwater has been managed in industrial areas was "no longer appropriate" in achieving the expected environmental outcomes.
Both councils agreed changes need to be made to regional stormwater rules, the spokesperson said.
A multi-pronged strategy which combines stormwater treatment with a tighter catchment management framework is proposed.
Filling in the lake is one of many proposed changes.
Other ideas include a focus of "on property controls" in the industrial catchment which currently has stormwater flow into the lake. Tightening of rules around industrial activity is also part of this.
Adding stormwater treatment devices at the end of pipes to contain and remove contaminants such as spills, road runoff and overland flows which may enter the water.
Hastings District Council will decide on Tuesday whether to agree to the proposed approach or continue with the current system.
A budget of $2m has been proposed for the district council to carry out the work.