The Auckland region saw the lowest increase, up 1 per cent, raising the average value of houses to $1,053,948, while Napier saw the biggest increase, up 16.5 per cent, to $488,236.
Auckland's increase was the slowest annual rate for the city since August 2017.
Queenstown Lakes District house values continued to climb to new heights, up 7.2 per cent, to $1,114,358.
While Christchurch house prices lowered, by 0.8 per cent, to $494,564.
"Christchurch is the only main centre to see values drop over the past year, while many regional areas of the South Island continue to see values rise including Nelson and Tasman, Central Otago and the MacKenzie District as well as Southland and Invercargill."
In the provinces the South Island's Mackenzie District continued to see a surge in growth in value, rising 23.5 per cent year on year and 8.1 per cent in the past three months.
While Auckland had not jumped up in value, other nearby provincial areas had.
In South Wairarapa values jumped to rise up 23.2 per cent year on year and 6.0 per cent over the past three months; Masterton values were up 18.1 per cent year on year and 2.8 per cent over the past three months.