Trustee Gary Bramley (Kaeo) said the first three birds were caught at Mataraua Forest, near Waipoua, at 6.30am on Friday and taken by helicopter to Puketi, where they were released at 11am. A team of eight experts remained at Mataraua hoping to catch five pairs in total.
"It's a big milestone for the project. It's been a long time coming," Mr Bramley said.
Mataraua is home to the only viable population of kokako left in Northland; a census in 2010 showed numbers were high enough to allow a transfer to Puketi.
The trust has permission to move 10 birds this year and 10 more in 2013.
Mr Bramley said the trust was trying to transfer pairs in the hope they would stay together and breed. The birds had been fitted with radio transmitters so they could be tracked.
Recorded kokako calls were being played to persuade the birds to stay in the core pest-trapping area.
If they moved the volunteers would have to follow them by expanding the trapping area. Rats and possums are their main threat.
The kokako project is led by the trust with help from the Department of Conservation, Te Roroa (Waipoua) and Piki Te Aroha Marae.
About 1400 kokako are believed to be living in the North Island; a South Island subspecies is thought to be extinct. The number clinging on at Puketi before the release is not known but could be as low as two.
Two Puketi kokako are being bred at Hamilton zoo and two more are on pest-free Lady Alice Island in Bream Bay. They will also be brought home to Puketi.
Go to www.puketi.org.nz for more.